SCI‐Publications in journals with peer review process
S Rothe, P Daferner, S Heide, D Krause, F Schmieder, N Koukourakis, JW Czarske, „Benchmarking analysis of computer generated holograms for complex wavefront shaping using pixelated phase modulators“, Optics Express 29 (23), 37602-37616
S Heckel, C Bilsing, M Wittmann, T Gemming, L Büttner, J Czarske, J Simmchen, “ Beyond Janus Geometry: Characterization of Flow Fields Around Nonspherical Photocatalytic Microswimmers“, ChemRxiv 2021
M Joppa, M Bermuske, F Rüdiger, L Büttner, J Fröhlich, JW Czarske, “ Measurement and Numerical Simulation of the Velocity Profile in the Thin Film of an Impinging Water Jet“, Journal of Fluids Engineering 144 (3), 031302
L Grüter, R Nauber, J Czarske, “ Non-invasive aberration correction and adaptive ultrasound imaging with a time reversal virtual array“, tm-Technisches Messen 88 (s1), s34-s36
H Emmerich, L Schaller, R Nauber, L Knüpfer, S Heitkam, J Czarske, L Büttner, “ Linear, spatio-temporally resolved ultrasound measurement of the liquid fraction distribution in froth“, tm-Technisches Messen 88 (9), 562-570
H. Radner, J. Stange, L. Büttner, J. Czarske, “Field programmable system‐on‐chip based control system for real‐time distortion correction in optical imaging”, IEEE Transactions on Industrial Electronics 68(4), 3370‐3379, 2021
Kayvan Forouhesh Tehrani, Nektarios Koukourakis, Jürgen Czarske, Luke J Mortensen, “In situ measurement of the isoplanatic patch for imaging through intact bone”, Journal of Biophotonics, e202000160, “cover page of the journal” (2021)
S. Rothe, Q. Zhang, N. Koukourakis, J. Czarske, “Intensity‐only Mode Decomposition on Multimode Fibers using a Densely Connected Convolutional Network”, Journal of Lightwave Technology, DOI: 10.1109/JLT.2020.3041374 (2021).
S. Burgmann, M. Dues, B. Barwari, J. Steinbock, L. Büttner, J. Czarske, U. Janoske, “Flowmeasurements in the wake of an adhering and oscillating droplet using laser Doppler velocity profile sensor”, Exp. Fluids (2021)
D. Weik, R. Nauber, C. Kupsch, L. Büttner, J. Czarske “Uncertainty Quantification of Ultrasound Image Velocimetry for Liquid Metal Flow Mapping” IEEE Transactions on Instrumentation and Measurement DOI: 10.1109/TIM.2021.3065433, 2021
Wenjie Wang, Florian Lemke, Matthias Wapler, Ulrike Wallrabe, Juergen Czarske, “3D‐ scanning microscopy with adaptive lenses and prisms for zebrafish studies“ Journal of Optical Microsystems of SPIE, 2021
J. Sun, N. Koukourakis, J. Czarske, „Complex Wavefront Shaping through a Multi‐Core Fiber“, Applied Sciences 11(9):3949. https://doi.org/10.3390/app11093949, 2021
J. Sun, N. Koukourakis, J. Guck, J. Czarske, „Rapid computational cell‐rotation about arbitrary axes in 3D with multi‐core fiber“, Biomed. Opt. Express 12, 3423‐3437 (2021), DOI:https://doi.org/10.1364/BOE.423035
A. Filippatos, B. Grüber, J. Lich, T. Wollmann, B. Zhou, R. Kuschmierz, E. Koch, J. Czarske, M. Gude, “Design and testing of polar‐orthotropic multi‐layered composites under rotational load”,Materials & Design,Vol. 207,2021, https://doi.org/10.1016/j.matdes.2021.109853.
F. Schmieder, R. Habibey, J. Striebel, L. Buettner, J. Czarske, V. Busskamp „Tracking long-term functional connectivity maps in human stem-cell-derived neuronal networks by holographic-optogenetic stimulation“ , bioRxiv 2021, https://doi.org/10.1101/2021.05.11.443589
O. Rothkamm, J. Gürtler, J. Czarske, R. Kuschmierz, „Dense U‐Net for Limited Angle Tomography of Sound Pressure Fields“, Applied Sciences 11 (10), 4570, 2021, https://doi.org/10.3390/app11104570
S Junge, F Schmieder, P Sasse, J Czarske, ML Torres-Mapa, A Heistkam,“ Holographic Optogenetic Stimulation with Calcium Imaging to Probe and Visualize Cardiac Activity“, European Conference on Biomedical Optics, EW3B. 5
Z Gao, H Radner, L Büttner, H Ye, X Li, J Czarske, “ Distortion correction for particle image velocimetry using multiple-input deep convolutional neural network and Hartmann-Shack sensing“ , Optics Express 29 (12), 18669-18687,
E Jorswieck, A Lonnstrom, KL Besser, S Rothe, JW Czarske, “ Achievable Physical-Layer Secrecy in Multi-Mode Fiber Channels using Artificial Noise“, arXiv preprint arXiv:2105.03137
F Schmieder, R Habibey, V Busskamp, L Büttner, JW Czarske, “ Analysis of human iPSC-derived neuronal networks (hiPSCNN) using holographic single cell and full field optogenetic stimulation“, Optics and the Brain, BM1B. 4
W Wang, F Lemke, MC Wapler, U Wallrabe, JW Czarske, N Koukourakis, “ 3D-scanning microscopy with adaptive lenses and prisms for zebrafish studies“, Journal of Optical Microsystems 1 (2), 02450
J Gürtler, F Greiffenhagen, J Woisetschläger, R Kuschmierz, J Czarske, “ Seedingless measurement of density fluctuations and flow velocity using high-speed holographic interferometry in a swirl-stabilized flame“, Optics and lasers in engineering 139, 106481, https://doi.org/10.1016/j.optlaseng.2020.106481
F Schmieder, R Habibey, V Busskamp, L Büttner, J Czarske, “ Correlation analysis of human iPSC-derived neuronal networks using holographic single cell and full field stimulation“, Optical Techniques in Neurosurgery, Neurophotonics, and Optogenetics 11629
S Burgmann, M Dues, B Barwari, J Steinbock, L Büttner, J Czarske, U. Janoske “ Flow measurements in the wake of an adhering and oscillating droplet using laser-Doppler velocity profile sensor“, Experiments in Fluids 62 (3), 1-16
J Lich, T Wollmann, A Filippatos, M Gude, J Czarske, R Kuschmierz “ Spatially Resolved Experimental Modal Analysis on High-Speed Composite Rotors Using a Non-Contact, Non-Rotating Sensor“, Sensors 21 (14), 4705
K. Forouhesh Tehrani, N. Koukourakis, J. Czarske, L. J. Mortensen „Inside Cover“ Journal of Biophotonics 14 (1), e202170003
T Fröhlich, B Zagar, M Bartholmai, J Beyerer, J Czarske „Plattform für Methoden, Systeme und Anwendungen in der Messtechnik“, „Frontmatter“ tm – Technisches Messen, vol. 88, no. 5, 2021
Invited talks at conferences (with proceedings)
J. Czarske, J. Sun, N. Koukourakis, “3D Cell‐Rotation using Multi‐Core Fiber‐based Lab‐on‐a‐ Chip and Wavefront Shaping”, Invited Talk, SPIE Optics + Photonics 2021, Nanoscience + Engineering Applications, Optical Trapping and Optical Micromanipulation XVIII (invited by Gabriel C. Spalding, Illinois Wesleyan Univ. (United States), Aug. 2021
J. Czarske, S. Rothe, N. Koukourakis “Digitally programmable light: Paradigm shifts in biomedicine”, Conference OPTO 2021, plenary talk, http://opto.edu.pl , invitation by Karolina Stefańska, President of Wrocław Univ. SPIE Student Chapter, Poland, virtual event, 12th ‐ 15th of July 2021
J. Czarske, S. Rothe, N. Koukourakis “Quantum Communication and Post‐quantum Cryptography – Physical Layer Security with Multimode Fibers using Densely Connected Convolutional Network”, Plenary Invited Talk, 4th International Conference focusing on Telecommunications and Photonics of Bangladesh University of Engineering and Technology (BUET), Dhaka, Bangladesh (invited by Aziz Rahman, City University, London, UK), 22‐24th December 2021
International conferences (reviewed, with proceedings)
L. Grüter, R. Nauber, C. Kupsch, J. Czarske, „Compensation of Strong Aberrations with a Time Reversal Virtual Array for Ultrasound Imaging“, Sensor and Measurement Science International (SMSI), 2021
Dennis Pohle, Stefan Rothe, Nektarios Koukourakis, and Jürgen Czarske, “Surveillance of a Multimode Fiber Network using Deep Learning,” Conference OPTO, July 2021, Poland
David Gonzalez, R. Kuschmierz, J. Czarske, ”Phase compensation on coherent fibre bundle s by means of 3D‐printed phase masks”, Conference OPTO, July 2021, Poland
Q. Zhang, S. Rothe, N. Koukourakis, J. Czarske, „Multimode Fiber Transmission Matrix Inversion with Densely Connected Convolutional Network for Physical Layer Security“, Conference on Lasers and Electro‐Optics (CLEO), 2021
J. Sun, N. Dunkelberg, N. Koukourakis, R. Kuschmierz, J. Czarske, J. Guck, „Multi‐dimensional cell‐rotation using multi‐core fibers and wavefront shaping „, Quantitative Phase Imaging VII, SPIE Photonics West, 2021
B. Krug, N. Koukourakis, J. Czarske, “Advancing impulsive stimulated Brillouin microscopy using a femtosecond laser for biomechanics”, Elastography and Tissue Biomechanics VII, SPIE Photonics West, 2021
E. Scharf, M. Sánchez, R. Kuschmierz, O. Schmidt, J. Czarske, “Minimally Invasive Fiber Endoscope with 3D Printed Diffractive Optical Element (DOE) for Biomedicine”, [Endoscopy, Sources, Fibers, Technology], OSA European Conferences on Biomedical Optics, 2021
J. Lich, T. Wollmann, R. Kuschmierz, A. Filippatos, M. Gude, J. Czarske, „Diffraction grating sensor for damage and modal analysis of fast rotating composite structures“, 11782‐30, Optical Measurement Systems for Industrial Inspection XII, SPIE Optical Metrology, 2021
R. Stephan, M. Steinke, A. Rühl, R. Kuschmierz, K. Hausmann, M. Ließmann, D. Ristau, and J. Czarske, „Design studies of aperiodic multicore fibres for lensless endoscopy“, ePoster ETu2A.30, Advances in Microscopic Imaging, OSA European Conferences on Biomedical Optics, 2021
R. Kuschmierz, E. Scharf, J. Czarske, „Additive manufacturing for minimally invasive endomicroscopy“, Additive Manufacturing: Medical Applications, Lasers in Manufacturing, 2021
A. Filippatos, J. Lich, T. Wollmann, C. Schnabel, R. Kuschmierz, E. Koch, J. Czarske, M. Gude, “Comparison and combination of dynamic optical measurement systems for in‐situ structural assessment of high‐speed composite rotors”, 6th International Conference of Engineering Against Failure (ICEAF), 2021
Invited talks (at seminars/workshops)
J. Czarske, “Paradigm‐shifting computational laser imaging for biomedicine”, Invited Seminar Presentation of Optics and Photonics Society (OPSI) of Iran (invited by Ali‐Reza Moradi, Institute for Advanced Studies in Basic Sciences, Zanjan, Iran), June 3rd, 2021
J. Czarske “Computational Adaptive Laser Metrology for Biomedicine”, Ringvorlesung‐German Lectures on Optics, invited by Prof Andreas Heinrich, Aalen/DGaO, 31 March 2021
Patent Applications
S. Heitkam, R. Nauber, L. Büttner, C. Kupsch, J. Czarske, „Verfahren und Anordnung zur ortsspezifischen Charakterisierung der Phasenzusammensetzung sowie der Strömungsverhältnisse innerhalb eines Schaumvolumens”, submitted to the Deutsches Patent‐ und Markenamt, 2021
L. Büttner, J. Czarske, M. Teich, N. Koukourakis, „Arrangement and method for disturbance correction for imaging flow measuring processes”, US Patent App. 16/628,39 & Patent China, ZL201880046397.4 Veröffentlichungsnummer: CN 110914736 B, 2021
S. Rothe, Q. Zhang, N. Koukourakis, R. Kuschmierz, J. Czarske, 4 „Referenzfreie Modendekomposition mit einem Neuronalen Netz bei einer hochmodigen Multimodefaser auf Basis reellwertiger Intensitätsverteilungen“, submitted to the Deutsches Patent‐ und Markenamt, 2021
R. Kuschmierz, J. Czarske, „Verfahren und Anordnung zur adaptierten Beleuchtung eines Objekts mit Licht“, submitted to Deutsches Patent‐ und Markenamt, 2021
L. Büttner, S. Heitkam, C. Kupsch, R. Nauber, J. Czarske: “Modellbasiertes Ultraschall‐ Messsystem für partikelbeladene Schäume “, 2021
R. Kuschmierz, E. Scharf, J. Czarske, “ Optisches System und Bildgebungsverfahren“, submitted to Deutsches Patent‐ und Markenamt, 2021
J. Czarske, N. Koukourakis „Verfahren zur Positionsbestimmung von Mikro‐ oder Nanorobotern in einem biologischen Gewebe, Mikro‐ oder Nanoroboter sowie Messanordnung ‐ Method for determining the position of micro or nanobots in biological tissue, micro‐ or nanobots as well as measuring arrangements”, Patent, 2021